How to Handle Taxes and VAT for SaaS Subscriptions

Author: Nathan CalderPublished: Sep 2, 2026Updated: Sep 2, 202617 min read

Effective SaaS tax management involves tracking customer locations, applying precise regional VAT rates, and using automated compliance tools to prevent cross-border legal risks.

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Featured image for How to Handle Taxes and VAT for SaaS Subscriptions

Effective SaaS tax management involves tracking customer locations, applying precise regional VAT rates, and using automated compliance tools to prevent cross-border legal risks.

Navigating cross-border indirect taxation is one of the most critical operational hurdles for modern recurring-revenue businesses. Understanding how to handle taxes and VAT for SaaS subscriptions requires a rigorous framework that accounts for varying jurisdiction rules, dynamic economic nexus thresholds, and real-time customer geolocation. As software companies scale globally, failing to collect or remit transaction taxes creates substantial retroactive liabilities, reputational damage, and valuation penalties during acquisition audits. This guide delivers a comprehensive, operational blueprint for software founders, financial controllers, and product managers to master global tax compliance across the United States, European Union, United Kingdom, Türkiye, the United Arab Emirates, and emerging international digital markets.

The Complexity of Global SaaS Taxation

Software as a Service (SaaS) models have fundamentally disrupted traditional tax concepts designed around physical manufacturing and tangible product shipments. Unlike on-premise software distributed via physical media, cloud-hosted software delivers functionality continuously through remote infrastructure. Consequently, tax authorities worldwide have rewritten their tax codes to capture digital revenue, transforming indirect taxation into a highly fragmented, destination-based compliance landscape.

Managing global SaaS tax liability is no longer restricted to where your company is incorporated or where your physical servers reside. Most tax authorities now enforce destination-based sourcing principles: tax obligations arise where the customer consumes or accesses the digital service. This shift means that a bootstrapped software business operating out of Istanbul, London, Dubai, or San Francisco can incur direct tax obligations in dozens of independent jurisdictions the moment customer acquisition crosses specific revenue or transaction volumes.

The regulatory environment continues to tighten. Tax administrations have modernized their auditing tools, leveraging automated data sharing, credit card settlement disclosures, and digital platform reporting directives. Operating under the assumption that digital products are inherently exempt or that cross-border enforcement is impractical exposes software companies to compounding financial exposure that can jeopardize funding rounds and future liquidity events.

Why SaaS Subscriptions Are Taxed Differently

Cloud software taxation deviates substantially from standard retail taxation due to the nuanced legal characterization of digital subscriptions. Depending on the local jurisdiction, SaaS can be categorized as a digital service, a telecommunication service, a license to use intellectual property, an information retrieval service, or non-taxable data processing. These varying definitions dictate whether sales tax, Value Added Tax (VAT), Goods and Services Tax (GST), or specific Digital Services Taxes (DST) apply.

Furthermore, recurring billing structures compound regulatory complexity. Unlike one-off digital downloads, SaaS subscriptions involve recurring automated invoices, seat upgrades, add-ons, downgrades, trial periods, and refund credits. Each transaction event requires recalculating tax liability based on the active rules of that specific billing date, the customer’s verified status, and any mid-cycle usage-based overage fees.

Uncollected tax liabilities accumulate silently. When a SaaS vendor fails to register and collect required taxes in a jurisdiction where it has established tax nexus, the statutory liability falls directly on the vendor—not the customer. Tax authorities can audit historical sales across standard look-back periods spanning three to seven years, demanding total unpaid taxes out of company revenue.

In addition to back taxes, tax authorities assess statutory penalties and compounded monthly interest. In many regions, statutory penalties for failure to register range from 10% to 50% of the total tax due, with additional administrative fines levied per unfiled tax return. During venture capital due diligence or Mergers & Acquisitions (M&A) processes, unaddressed cross-border tax liabilities frequently lead to substantial escrow holdbacks, price reductions, or cancelled transactions.

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Core Tax Principles Every SaaS Business Must Know

Establishing a resilient indirect tax infrastructure requires a clear understanding of foundational legal mechanisms. Modern digital taxation revolves around determining where your business has established a taxable connection, verifying where your customer is located, and knowing when your transaction volume triggers a formal registration requirement.

Defining Physical vs. Economic Nexus

Historically, tax liability required "physical nexus"—an actual office, warehouse, employee, or sales agent situated within a specific state or country. However, in modern digital commerce, "economic nexus" has become the primary standard. Economic nexus establishes a taxable presence purely through economic activity within a jurisdiction, regardless of physical presence.

In the United States, economic nexus standards were codified following the landmark 2018 Supreme Court ruling (South Dakota v. Wayfair, Inc.). States gained the authority to require remote sellers to collect and remit sales tax if their sales into that state exceeded designated financial or transactional thresholds. Internationally, similar principles govern VAT and GST regimes, where foreign digital service providers must register once they generate local sales, often without any minimum threshold for B2C transactions.

Nexus DimensionPhysical NexusEconomic Nexus
Primary TriggerReal estate, employees, independent contractors, inventoryGross sales revenue, total transaction counts
Enforcement ScopeDomestic/LocalCross-border, Remote, and International
Relevance to SaaSCorporate headquarters, remote engineering staffCustomer acquisition scale across global markets
Tracking RequirementPayroll and asset registersDynamic billing volume monitoring per jurisdiction

Primary Trigger

Physical Nexus

Real estate, employees, independent contractors, inventory

Economic Nexus

Gross sales revenue, total transaction counts

Enforcement Scope

Physical Nexus

Domestic/Local

Economic Nexus

Cross-border, Remote, and International

Relevance to SaaS

Physical Nexus

Corporate headquarters, remote engineering staff

Economic Nexus

Customer acquisition scale across global markets

Tracking Requirement

Physical Nexus

Payroll and asset registers

Economic Nexus

Dynamic billing volume monitoring per jurisdiction

The Two-Piece Evidence Rule for Customer Location (IP and Billing)

Because SaaS taxation is destination-based, accurately verifying the customer's location at the exact time of purchase is mandatory. Under major international frameworks, including European Union VAT directives, software vendors must collect and retain at least two non-conflicting pieces of commercial evidence confirming the customer's permanent residence or establishment.

Acceptable forms of customer location evidence include:

  • The customer's confirmed billing address.

  • The Internet Protocol (IP) address used during the checkout or sign-up event.

  • The country code associated with the bank issuing the credit card or payment method.

  • The country of the SIM card (for mobile or in-app subscription purchases).

  • The physical address where a hardware token or related software deployment occurs.

If these data points conflict (for example, a user with a German IP address paying with a US credit card and entering a UK billing address), standard compliance protocols require applying the tax rate of the billing address or collecting a third confirming document. All collected geolocation evidence must be stored securely for at least 5 to 10 years to withstand audit scrutiny.

Understanding Regional Tax Thresholds

Tax registration thresholds vary widely by market. In some jurisdictions, foreign SaaS vendors must register immediately upon making a single sale, while others offer safe-harbor revenue limits designed to protect micro-businesses.

For instance, the European Union enforces a €0 threshold for non-EU companies selling digital services directly to EU consumers (B2C). A US-based or Turkish SaaS business acquiring its very first consumer subscriber in France must register for EU VAT immediately. Conversely, individual US states typically apply economic nexus thresholds ranging from $100,000 in gross annual sales or 200 separate transactions, though specific metrics diverge across states.

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Executing a compliant global go-to-market strategy demands specific operational knowledge of key revenue regions. Tax rules are rarely uniform, and digital service definitions vary significantly between western economies, the Middle East, and emerging markets.

United States: State-by-State Sales Tax and Economic Nexus

The United States features one of the most intricate sales tax structures in the world. There is no national sales tax; instead, taxation is managed across more than 11,000 distinct state, county, city, and special district jurisdictions. Furthermore, the taxability of SaaS varies dramatically by state:

  • Fully Taxable States: States like New York, Pennsylvania, Texas (subject to a 20% exemption for information/data processing services), and Washington explicitly classify SaaS as taxable software or digital services.

  • Partially or Conditionally Taxable States: States like Ohio and Connecticut tax SaaS differently depending on whether the customer is a business or an individual consumer.

  • Non-Taxable States: States like California, Florida, and Nevada generally do not impose sales tax on pure cloud-based SaaS, provided no tangible media or downloadable software is transferred.

SaaS companies must continuously evaluate their revenue against individual state economic nexus thresholds (most commonly $100,000 in annual gross sales). Once reached, companies must apply for a sales tax permit, calculate localized rates via ZIP+4 address validation, and file state returns on monthly, quarterly, or semi-annual schedules.

European Union: Value Added Tax (VAT) and the OSS System

The European Union treats SaaS as an Electronically Supplied Service (ESS). The standard VAT rate varies across the 27 member states, ranging from 17% in Luxembourg to 27% in Hungary. To eliminate the burden of registering separately in every EU country, non-EU SaaS vendors selling to EU consumers can utilize the VAT One Stop Shop (OSS) non-Union scheme.

Under the OSS framework, a non-EU software company registers in a single chosen member state (such as Ireland or the Netherlands). The company files a single quarterly OSS return and remits a consolidated payment containing the VAT collected from all EU member states. The host tax authority then distributes the collected taxes to the respective countries on the vendor's behalf.

United Kingdom: Post-Brexit HMRC Regulations

Following its departure from the EU, the United Kingdom operates its own independent digital VAT regime managed by HM Revenue and Customs (HMRC). Non-UK SaaS companies selling digital services to UK consumers have a £0 registration threshold.

For B2C sales, foreign vendors must register for UK VAT directly through HMRC, collect the standard 20% VAT rate at the point of sale, issue compliant digital tax invoices, and submit quarterly returns. For B2B sales, the UK applies reverse charge principles, shifting the accounting responsibility to the VAT-registered UK business client.

Türkiye, UAE, and Emerging Regional Digital Tax Rules

Expanding beyond the US and Western Europe brings additional regulatory considerations:

  • Türkiye (TR): Under Turkish Law No. 6802 and VAT legislation, foreign providers of digital services to non-taxpayer Turkish individuals (B2C) must register under the "Special VAT Registration for Electronic Service Providers" (KDV3). The standard VAT rate of 20% must be declared and paid monthly. B2B transactions with Turkish entities possessing a corporate tax ID are handled via the domestic reverse charge mechanism (KDV2).

  • United Arab Emirates (AE): The UAE Federal Tax Authority (FTA) imposes a standard 5% VAT on electronically supplied services. Foreign businesses making taxable supplies in the UAE must register for VAT if their taxable turnover exceeds the mandatory registration threshold (AED 375,000), or immediately if supplying to non-registered UAE consumers where reverse charge does not apply.

  • Other Global Markets: Canada enforces federal GST/HST (5% to 15%) along with provincial sales taxes (QST, PST). Australia mandates a 10% GST on foreign digital services under simplified registration, and Japan requires non-resident digital service providers to account for the Japanese Consumption Tax (JCT).

+-----------------------------------------------------------------------------------+
|                        GLOBAL DIGITAL TAX COMPLIANCE MATRIX                       |
+------------------+-----------------------+-------------------+--------------------+
| Region / Country | Standard Tax Rate     | B2C Threshold     | Primary Mechanism  |
+------------------+-----------------------+-------------------+--------------------+
| United States    | 0% - 10.5% (Variable) | $100k / State     | State Registration |
| European Union   | 17% - 27% (By Country)| €0 (Non-EU Seller)| VAT One Stop Shop  |
| United Kingdom   | 20%                   | £0 (Foreign)      | HMRC Direct Portal |
| Türkiye (TR)     | 20%                   | 0 TRY (B2C)       | Electronic VAT (3) |
| UAE (AE)         | 5%                    | AED 375,000 / 0   | FTA e-Services     |
+------------------+-----------------------+-------------------+--------------------+

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B2B vs. B2C SaaS Subscriptions: Critical Distinctions

Accurately distinguishing between business customers (B2B) and individual consumers (B2C) is the most critical operational filter in digital tax processing. Applying consumer tax rates to enterprise clients creates billing friction and reconciliation errors, while treating consumer sales as tax-exempt B2B transactions creates direct non-compliance exposure.

B2C Requirements: Charging Tax at the Point of Sale

When selling SaaS subscriptions directly to individual retail consumers (B2C), the software vendor is legally obligated to act as the tax collector. The checkout engine must calculate the destination tax rate in real time, add that amount on top of the net subscription price (or back-calculate it from a tax-inclusive list price), collect the funds, and hold them for periodic remittance to the respective state or national tax agency.

B2C compliance requires maintaining high-availability checkout APIs capable of resolving location, determining specific product taxability, and outputting localized pricing within milliseconds. Failing to calculate the correct tax at checkout leaves the vendor liable for paying the tax out of pocket.

B2B Requirements: Applying the Reverse Charge Mechanism

In cross-border B2B digital transactions, international tax systems typically apply the Reverse Charge Mechanism (often referred to as customer self-assessment). Under reverse charge rules, the seller does not collect indirect tax on the transaction. Instead, the tax liability transfers directly to the purchasing business, which reports both input and output VAT simultaneously on its domestic tax return.

Applying reverse charge safely requires meeting three conditions:

  1. The customer must be an established business entity located in a different jurisdiction from the seller.

  2. The customer must supply a verifiable, valid domestic tax identification number (such as an EU VAT ID, UK VAT number, or Turkish Tax ID).

  3. The seller must issue a formal invoice stating that the transaction is zero-rated under the reverse charge mechanism (e.g., "Reverse charge: customer to account for VAT/GST").

How to Properly Validate International Tax IDs and VAT Numbers

Allowing users to bypass sales tax simply by typing arbitrary numbers into a tax ID field is a major compliance vulnerability. Tax auditors systematically check transaction logs against government databases. If an auditor discovers that your billing engine exempted transactions based on invalid or mismatched tax IDs, your company will be billed for the uncollected tax plus penalties.

To mitigate this risk, SaaS checkout flows must integrate automated, synchronous validation against official tax authority APIs:

  • European Union: Real-time integration with the European Commission's VIES (VAT Information Exchange System) API to verify VAT ID format, validity, and matching company name/address.

  • United Kingdom: Validation via the HMRC VAT API.

  • Australia / New Zealand: Validation against the Australian Business Register (ABR) for ABN validation.

  • Türkiye: Verification of the 10-digit VKN (Vergi Kimlik Numarası) or 11-digit T.C. Kimlik Numarası via the Revenue Administration (GİB) infrastructure.

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A 5-Step Framework for SaaS Tax Compliance

Establishing a global tax workflow requires transforming manual accounting processes into an automated, programmatic pipeline. The following five-step roadmap provides a practical framework for scaling subscription businesses.

Step 1: Monitor Your Global Sales and Revenue Thresholds

Compliance starts with comprehensive transaction monitoring. SaaS businesses must implement reporting that tracks gross sales revenue, total paid order counts, and customer location attributes grouped by jurisdiction over a rolling 12-month window.

Setting up automated alerts when sales reach 70% to 80% of a regional economic nexus threshold allows your finance team to prepare tax registrations well before statutory deadlines take effect.

Step 2: Register in Applicable Tax Jurisdictions

Once an economic threshold is crossed—or prior to making your first B2C sale in regions with a €0/£0 threshold—you must register for a digital sales tax permit with the relevant tax authority.

  • For the US, register through individual state departments of revenue or the Streamlined Sales Tax (SST) program.

  • For the EU, apply for the non-Union VAT OSS scheme through the tax authority of your designated member state.

  • For the UK, apply for a non-resident VAT registration directly with HMRC.

  • For TR and UAE, register through GİB and FTA online tax portals.

Step 3: Configure Checkout for Real-Time Tax Calculation

Integrate a dedicated tax engine into your checkout workflow. When a buyer initiates a checkout session, the system should:

  1. Capture the customer's IP address and requested billing address.

  2. Confirm B2B status via real-time Tax ID API validation.

  3. Call the tax calculation engine to return the exact regional, state, and local tax rate.

  4. Display the itemized tax transparently on the final payment confirmation screen before processing the charge.

Step 4: Issue Compliant Tax Invoices

In many international jurisdictions, issuing a simple payment receipt is legally insufficient for tax deduction. B2B customers require compliant VAT/sales tax invoices containing mandatory fields:

  • Unique, sequential invoice numbering.

  • Full legal business name and registered address of both seller and buyer.

  • Seller's and buyer's valid tax registration numbers.

  • Date of supply and invoice issue date.

  • Net subscription amount, applied tax rate percentage, total calculated tax, and gross amount in the transactional currency.

  • Explicit reference to "Reverse Charge" where tax has not been applied.

Step 5: Remit Taxes and File Periodic Returns

Collecting tax is only half the battle; collected funds must be periodically reported and remitted to the appropriate authorities. Depending on regional volume, returns must be filed on monthly, quarterly, or annual cadences. Retain complete transaction ledgers, currency exchange rates at the time of invoicing, and tax ID validation receipts to simplify reconciliation during periodic audits.

PROCESS STEPS

End-to-End SaaS Tax Compliance Lifecycle

The five operational phases required to establish and maintain global tax compliance.

01

Nexus & Threshold Monitoring

Continuously aggregate transaction volume and gross billing metrics across all target jurisdictions.

02

Jurisdictional Registration

Obtain local sales tax licenses, OSS registrations, or foreign electronic service VAT registrations.

03

Real-Time Calculation & Checkout Logic

Dynamically verify location evidence, validate B2B tax IDs, and apply accurate tax rates at point of sale.

04

Compliant Invoice Generation

Produce automated digital invoices containing all mandatory statutory data points and legal disclosures.

05

Periodic Filing & Tax Remittance

Reconcile tax accounts, file statutory regional returns, and remit collected taxes before local deadlines.

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Automation Strategies: In-House vs. Outsourced Compliance

Executing cross-border tax compliance manually across dozens of countries is technically and operationally unsustainable. Modern SaaS businesses face a fundamental architectural choice: integrate automated tax calculation software alongside standard payment gateways, or outsource the entire billing and compliance liability to a Merchant of Record (MoR).

Using Dedicated Tax Calculation Software

Under the direct integration model, the SaaS company remains the legal seller of record, retaining all merchant accounts (e.g., Stripe, Adyen, Braintree) while integrating specialized tax engines via API (such as Stripe Tax, Anrok, Avalara, or TaxJar).

How it works:

  • The payment gateway processes transactions directly into your bank account.

  • The connected tax software calculates the appropriate tax at checkout and records the transaction details.

  • The software generates filing-ready reports or coordinates with localized accounting partners to submit returns.

Advantages & Drawbacks:

  • Pros: Lower processing fees (typically standard gateway pricing of 2.9% + $0.30 plus small per-transaction tax API fees), direct customer relationships, full ownership of subscription data, and flexible custom invoicing.

  • Cons: Your company remains legally liable for registering, filing returns, and handling tax audits across every individual jurisdiction.

The Merchant of Record (MoR) Model: Shifting the Liability

A Merchant of Record (such as Paddle, Lemon Squeezy, FastSpring, or Cleverbridge) acts as a legal reseller of your software. When a customer purchases a subscription, they are technically buying from the MoR, which instantly licenses the software from you.

How it works:

  • The MoR's corporate entity appears on the customer's credit card statement and invoice.

  • The MoR assumes 100% legal responsibility for global tax registration, real-time calculation, invoice generation, local filing, and tax remittance.

  • The SaaS company receives a consolidated payout (net of processing fees, refunds, and collected taxes) alongside a single B2B invoice from the MoR.

Advantages & Drawbacks:

  • Pros: Complete offloading of cross-border tax liability, no requirement to register in multiple states or countries, simplified single-payout accounting, and zero local filing overhead.

  • Cons: Higher take rates (typically 5% to 8% per transaction), potential limitations on enterprise billing flexibility, and indirect control over payment routing and checkout branding.

Feature / MetricDirect Gateway + Tax APIMerchant of Record (MoR)
Legal Tax LiabilityRests on the SaaS CompanyRests on the Merchant of Record
Tax Registration OverheadManual per jurisdictionFully handled by MoR
Effective Fee Range~2.9% - 3.5% + fixed API costs~5.0% - 8.5% total transaction fee
International Filing & RemittanceIn-house team or local CPAsFully automated and managed
Enterprise B2B Custom ContractsFull control and custom termsModerate flexibility; standardized flows
Audit Defense ResponsibilitySaaS Company Finance/LegalHandled entirely by the MoR

Direct Gateway + Tax API

Rests on the SaaS Company

Merchant of Record (MoR)

Rests on the Merchant of Record

Tax Registration Overhead

Direct Gateway + Tax API

Manual per jurisdiction

Merchant of Record (MoR)

Fully handled by MoR

Effective Fee Range

Direct Gateway + Tax API

~2.9% - 3.5% + fixed API costs

Merchant of Record (MoR)

~5.0% - 8.5% total transaction fee

International Filing & Remittance

Direct Gateway + Tax API

In-house team or local CPAs

Merchant of Record (MoR)

Fully automated and managed

Enterprise B2B Custom Contracts

Direct Gateway + Tax API

Full control and custom terms

Merchant of Record (MoR)

Moderate flexibility; standardized flows

Audit Defense Responsibility

Direct Gateway + Tax API

SaaS Company Finance/Legal

Merchant of Record (MoR)

Handled entirely by the MoR

Which Approach Suits Your SaaS Growth Stage?

  • Early-Stage & Bootstrap Stage (<$1M ARR): Leveraging a Merchant of Record is often the most cost-effective path. It allows small engineering and product teams to scale globally without hiring international tax attorneys or managing dozens of foreign registrations.

  • Mid-Market Growth Stage ($1M - $10M ARR): Companies with high B2B concentrations often begin transitioning to direct payment gateways paired with automated tax engines (like Stripe Tax or Anrok) to optimize payment margins and support custom enterprise sales workflows.

  • Enterprise SaaS ($10M+ ARR): Enterprise SaaS vendors typically run in-house compliance using dedicated tax engines (like Avalara or Vertex) integrated into ERP systems (like NetSuite), maintaining dedicated corporate tax counsel to handle localized audits and nexus filings.

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Frequently Asked Questions

Do I need to charge VAT on SaaS subscriptions to international clients?

Yes, if the client is an individual consumer (B2C), you must collect and remit VAT at the rate of their home jurisdiction once registration thresholds apply. For verified business clients (B2B), cross-border VAT is typically not charged directly, provided you apply the reverse charge mechanism with a validated corporate tax ID.

Is Software as a Service subject to US sales tax across all states?

No, SaaS taxability varies by individual state law. While states like New York and Washington tax SaaS at standard rates, other states such as California and Florida generally treat cloud-hosted software as exempt, provided no tangible personal property or downloadable software is transferred.

What happens if a SaaS company fails to collect and remit required VAT?

The tax authority holds the software vendor liable for the total uncollected tax out of pocket. In addition to the unpaid principal, authorities assess statutory non-compliance penalties ranging from 10% to 50% plus compounded monthly interest, which can severely impact corporate valuation during due diligence.

How does the European Union VAT One Stop Shop (OSS) simplify compliance?

The OSS system enables non-EU and EU SaaS businesses selling to consumers across all 27 member states to register in a single member country. Vendors file one quarterly consolidated return and make a single tax remittance, avoiding the need to establish separate tax registrations in each individual EU nation.

What is the difference between a Payment Gateway with a Tax API and a Merchant of Record?

A payment gateway processes transactions while leaving the legal tax registration, collection, and filing liability with your company. A Merchant of Record acts as the legal reseller of your software, assuming complete legal and financial liability for global indirect tax calculation, compliance, and remittance.

What data points are required to prove customer location for SaaS tax audits?

Major tax frameworks require at least two non-conflicting commercial evidence items. Standard accepted proofs include the customer's verified billing address, the IP address at the time of purchase, the country of the card-issuing bank, or the country identifier of a mobile SIM card.

How should SaaS companies handle sales tax on subscription discounts and refunds?

Sales tax and VAT must be calculated strictly on the net discounted amount paid by the customer rather than the list price. When processing partial or full subscription refunds, the corresponding portion of the collected tax must be credited back to the customer and adjusted on the vendor's subsequent tax return.

Does my SaaS business have to collect tax in the UAE and Türkiye?

Yes, foreign providers selling electronic services to consumers in Türkiye must register for Special VAT (KDV3) and charge 20% VAT. In the UAE, foreign digital service sellers must register and collect 5% VAT on supplies made to consumers or non-registered businesses in the country.

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How to Handle Taxes and VAT for SaaS Subscriptions | Webizm